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  • aacomp.tgz

    • Deimmunizer protocol input file

    • Rosetta residue type composition energy file

    • Defines penalties deviations from desired residue type compositions during design (See References for more details)

  • svmlist.tgz

    • Deimmunizer protocol input file

    • List of SVM models for alleles being used in protocol

  • svmpssmlist.tgz

    • Deimmunizer protocol input file

    • List of PSSMs for alleles being used in protocol (if enabled)

  • svmranklist.tgz

    • Deimmunizer protocol input file

    • Ranked list of SVM models used in protocol

  • deimmunized-designs.tgz

    • Deimmunized design structures

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